The list
I am writing a review of two-photon uncaging of glutamate. Much as it is good for my career (?) to write reviews, I find them very painful to write as they suck time away from the lab. However, I thought this is going to be a short review, as there aren’t many publications in this field yet. Well it turns out there are far more than I thought! Since we published our first paper in 2001[1], there have been another 39 papers papers published using or reviewing two-photon uncaging of MNI-glutamate (historical list below: [2-40]). Many of these actually cite our original paper (highlighted in bold).
1. Matsuzaki M, Ellis-Davies GCR, Nemoto T, Miyashita Y, Iino M, Kasai H. (2001) Dendritic spine geometry is critical for AMPA receptor expression in hippocampal CA1 pyramidal neurons. Nat Neurosci, 4, 1086-92.
2. Andrasfalvy BK, Smith MA, Borchardt T, Sprengel R, Magee JC. (2003) Impaired regulation of synaptic strength in hippocampal neurons from GluR1-deficient mice. J Physiol, 552, 35-45.
3. Smith MA, Ellis-Davies GCR, Magee JC. (2003) Mechanism of the distance-dependent scaling of Schaffer collateral synapses in rat CA1 pyramidal neurons. J Physiol, 548, 245-58.
4. Yasuda R, Sabatini BL, Svoboda K. (2003) Plasticity of calcium channels in dendritic spines. Nat Neurosci, 6, 948-55.
5. Carter AG, Sabatini BL. (2004) State-dependent calcium signaling in dendritic spines of striatal medium spiny neurons. Neuron, 44, 483-93.
6. Matsuzaki M, Honkura N, Ellis-Davies GCR, Kasai H. (2004) Structural basis of long-term potentiation in single dendritic spines. Nature, 429, 761-6.
7. Bloodgood BL, Sabatini BL. (2005) Neuronal activity regulates diffusion across the neck of dendritic spines. Science, 310, 866-9.
8. Ngo-Anh TJ, Bloodgood BL, Lin M, Sabatini BL, Maylie J, Adelman JP. (2005) SK channels and NMDA receptors form a Ca-mediated feedback loop in dendritic spines. Nat Neurosci, 8, 642-9.
9. Noguchi J, Matsuzaki M, Ellis-Davies GCR, Kasai H. (2005) Spine-neck geometry determines NMDA receptor-dependent Ca signaling in dendrites. Neuron, 46, 609-22.
10. Sobczyk A, Scheuss V, Svoboda K. (2005) NMDA receptor subunit-dependent [Ca] signaling in individual hippocampal dendritic spines. J Neurosci, 25, 6037-46.
11. Tanaka J, Matsuzaki M, Tarusawa E, Momiyama A, Molnar E, Kasai H, Shigemoto R. (2005) Number and density of AMPA receptors in single synapses in immature cerebellum. J Neurosci, 25, 799-807.
12. Araya R, Eisenthal KB, Yuste R. (2006) Dendritic spines linearize the summation of excitatory potentials. Proc Natl Acad Sci U S A, 103, 18799-804.
13. Araya R, Jiang J, Eisenthal KB, Yuste R. (2006) The spine neck filters membrane potentials. Proc Natl Acad Sci U S A, 103, 17961-6.
14. Beique JC, Lin DT, Kang MG, Aizawa H, Takamiya K, Huganir RL. (2006) Synapse-specific regulation of AMPA receptor function by PSD-95. Proc Natl Acad Sci U S A, 103, 19535-40.
15. Gasparini S, Magee JC. (2006) State-dependent dendritic computation in hippocampal CA1 pyramidal neurons. J Neurosci, 26, 2088-100.
16. Losonczy A, Magee JC. (2006) Integrative properties of radial oblique dendrites in hippocampal CA1 pyramidal neurons. Neuron, 50, 291-307.
17. Scheuss V, Yasuda R, Sobczyk A, Svoboda K. (2006) Nonlinear [Ca] signaling in dendrites and spines caused by activity-dependent depression of Ca extrusion. J Neurosci, 26, 8183-94.
18. Soler-Llavina GJ, Sabatini BL. (2006) Synapse-specific plasticity and compartmentalized signaling in cerebellar stellate cells. Nat Neurosci, 9, 798-806.
19. Svoboda K, Yasuda R. (2006) Principles of two-photon excitation microscopy and its applications to neuroscience. Neuron, 50, 823-39.
20. Yasuda R, Harvey CD, Zhong H, Sobczyk A, van Aelst L, Svoboda K. (2006) Supersensitive Ras activation in dendrites and spines revealed by two-photon fluorescence lifetime imaging. Nat Neurosci, 9, 283-91.
21. Alvarez VA, Ridenour DA, Sabatini BL. (2007) Distinct structural and ionotropic roles of NMDA receptors in controlling spine and synapse stability. J Neurosci, 27, 7365-76.
22. Alvarez VA, Sabatini BL. (2007) Anatomical and physiological plasticity of dendritic spines. Annu Rev Neurosci, 30, 79-97.
23. Araya R, Nikolenko V, Eisenthal KB, Yuste R. (2007) Sodium channels amplify spine potentials. Proc Natl Acad Sci U S A, 104, 12347-52.
24. Asrican B, Lisman J, Otmakhov N. (2007) Synaptic strength of individual spines correlates with bound Ca2+-calmodulin-dependent kinase II. J Neurosci, 27, 14007-11.
25. Bloodgood BL, Sabatini BL. (2007) Ca signaling in dendritic spines. Curr Opin Neurobiol, 17, 345-51.
26. Bloodgood BL, Sabatini BL. (2007) Nonlinear regulation of unitary synaptic signals by CaV(2.3) voltage-sensitive calcium channels located in dendritic spines. Neuron, 53, 249-60.
27. Carter AG, Soler-Llavina GJ, Sabatini BL. (2007) Timing and location of synaptic inputs determine modes of subthreshold integration in striatal medium spiny neurons. J Neurosci, 27, 8967-77.
28. Ellis-Davies GCR, Matsuzaki M, Paukert M, Kasai H, Bergles DE. (2007) 4-Carboxymethoxy-5,7-dinitroindolinyl-Glu: an improved caged glutamate for expeditious ultraviolet and two-photon photolysis in brain slices. J Neurosci, 27, 6601-4.
29. Gasparini S, Losonczy A, Chen X, Johnston D, Magee JC. (2007) Associative pairing enhances action potential back-propagation in radial oblique branches of CA1 pyramidal neurons. J Physiol, 580, 787-800.
30. Harvey CD, Svoboda K. (2007) Locally dynamic synaptic learning rules in pyramidal neuron dendrites. Nature, 450, 1195-200.
31. Nikolenko V, Poskanzer KE, Yuste R. (2007) Two-photon photostimulation and imaging of neural circuits. Nat Methods, 4, 943-50.
32. Sabatini BL. (2007) Neuroscience: neighbourly synapses. Nature, 450, 1173-5.
33. Sobczyk A, Svoboda K. (2007) Activity-dependent plasticity of the NMDA-receptor fractional Ca current. Neuron, 53, 17-24.
34. Bloodgood BL, Sabatini BL. (2008) Regulation of synaptic signalling by postsynaptic, non-glutamate receptor ion channels. J Physiol, 586, 1475-80.
35. Busetto G, Higley MJ, Sabatini BL. (2008) Developmental presence and disappearance of postsynaptically silent synapses on dendritic spines of rat layer 2/3 pyramidal neurons. J Physiol, 586, 1519-27.
36. Honkura N, Matsuzaki M, Noguchi J, Ellis-Davies GCR, Kasai H. (2008) The subspine organization of actin fibers regulates the structure and plasticity of dendritic spines. Neuron, 57, 719-29.
37. Losonczy A, Makara JK, Magee JC. (2008) Compartmentalized dendritic plasticity and input feature storage in neurons. Nature, 452, 436-41.
38. Matsuzaki M, Ellis-Davies GCR, Kasai H. (2008) Three-dimensional mapping of unitary synaptic connections by two-photon macro photolysis of caged glutamate. J Neurophysiol, 99, 1535-44.
39. Tanaka J, Horiike Y, Matsuzaki M, Miyazaki T, Ellis-Davies GCR, Kasai H. (2008) Protein synthesis and neurotrophin-dependent structural plasticity of single dendritic spines. Science, 319, 1683-7.
40. Heine M, Groc L, Frischknecht R, Beique JC, Lounis B, Rumbaugh G, Huganir RL, Cognet L, Choquet D. (2008) Surface mobility of postsynaptic AMPARs tunes synaptic transmission. Science, 320, 201-5.
I am writing a review of two-photon uncaging of glutamate. Much as it is good for my career (?) to write reviews, I find them very painful to write as they suck time away from the lab. However, I thought this is going to be a short review, as there aren’t many publications in this field yet. Well it turns out there are far more than I thought! Since we published our first paper in 2001[1], there have been another 39 papers papers published using or reviewing two-photon uncaging of MNI-glutamate (historical list below: [2-40]). Many of these actually cite our original paper (highlighted in bold).
1. Matsuzaki M, Ellis-Davies GCR, Nemoto T, Miyashita Y, Iino M, Kasai H. (2001) Dendritic spine geometry is critical for AMPA receptor expression in hippocampal CA1 pyramidal neurons. Nat Neurosci, 4, 1086-92.
2. Andrasfalvy BK, Smith MA, Borchardt T, Sprengel R, Magee JC. (2003) Impaired regulation of synaptic strength in hippocampal neurons from GluR1-deficient mice. J Physiol, 552, 35-45.
3. Smith MA, Ellis-Davies GCR, Magee JC. (2003) Mechanism of the distance-dependent scaling of Schaffer collateral synapses in rat CA1 pyramidal neurons. J Physiol, 548, 245-58.
4. Yasuda R, Sabatini BL, Svoboda K. (2003) Plasticity of calcium channels in dendritic spines. Nat Neurosci, 6, 948-55.
5. Carter AG, Sabatini BL. (2004) State-dependent calcium signaling in dendritic spines of striatal medium spiny neurons. Neuron, 44, 483-93.
6. Matsuzaki M, Honkura N, Ellis-Davies GCR, Kasai H. (2004) Structural basis of long-term potentiation in single dendritic spines. Nature, 429, 761-6.
7. Bloodgood BL, Sabatini BL. (2005) Neuronal activity regulates diffusion across the neck of dendritic spines. Science, 310, 866-9.
8. Ngo-Anh TJ, Bloodgood BL, Lin M, Sabatini BL, Maylie J, Adelman JP. (2005) SK channels and NMDA receptors form a Ca-mediated feedback loop in dendritic spines. Nat Neurosci, 8, 642-9.
9. Noguchi J, Matsuzaki M, Ellis-Davies GCR, Kasai H. (2005) Spine-neck geometry determines NMDA receptor-dependent Ca signaling in dendrites. Neuron, 46, 609-22.
10. Sobczyk A, Scheuss V, Svoboda K. (2005) NMDA receptor subunit-dependent [Ca] signaling in individual hippocampal dendritic spines. J Neurosci, 25, 6037-46.
11. Tanaka J, Matsuzaki M, Tarusawa E, Momiyama A, Molnar E, Kasai H, Shigemoto R. (2005) Number and density of AMPA receptors in single synapses in immature cerebellum. J Neurosci, 25, 799-807.
12. Araya R, Eisenthal KB, Yuste R. (2006) Dendritic spines linearize the summation of excitatory potentials. Proc Natl Acad Sci U S A, 103, 18799-804.
13. Araya R, Jiang J, Eisenthal KB, Yuste R. (2006) The spine neck filters membrane potentials. Proc Natl Acad Sci U S A, 103, 17961-6.
14. Beique JC, Lin DT, Kang MG, Aizawa H, Takamiya K, Huganir RL. (2006) Synapse-specific regulation of AMPA receptor function by PSD-95. Proc Natl Acad Sci U S A, 103, 19535-40.
15. Gasparini S, Magee JC. (2006) State-dependent dendritic computation in hippocampal CA1 pyramidal neurons. J Neurosci, 26, 2088-100.
16. Losonczy A, Magee JC. (2006) Integrative properties of radial oblique dendrites in hippocampal CA1 pyramidal neurons. Neuron, 50, 291-307.
17. Scheuss V, Yasuda R, Sobczyk A, Svoboda K. (2006) Nonlinear [Ca] signaling in dendrites and spines caused by activity-dependent depression of Ca extrusion. J Neurosci, 26, 8183-94.
18. Soler-Llavina GJ, Sabatini BL. (2006) Synapse-specific plasticity and compartmentalized signaling in cerebellar stellate cells. Nat Neurosci, 9, 798-806.
19. Svoboda K, Yasuda R. (2006) Principles of two-photon excitation microscopy and its applications to neuroscience. Neuron, 50, 823-39.
20. Yasuda R, Harvey CD, Zhong H, Sobczyk A, van Aelst L, Svoboda K. (2006) Supersensitive Ras activation in dendrites and spines revealed by two-photon fluorescence lifetime imaging. Nat Neurosci, 9, 283-91.
21. Alvarez VA, Ridenour DA, Sabatini BL. (2007) Distinct structural and ionotropic roles of NMDA receptors in controlling spine and synapse stability. J Neurosci, 27, 7365-76.
22. Alvarez VA, Sabatini BL. (2007) Anatomical and physiological plasticity of dendritic spines. Annu Rev Neurosci, 30, 79-97.
23. Araya R, Nikolenko V, Eisenthal KB, Yuste R. (2007) Sodium channels amplify spine potentials. Proc Natl Acad Sci U S A, 104, 12347-52.
24. Asrican B, Lisman J, Otmakhov N. (2007) Synaptic strength of individual spines correlates with bound Ca2+-calmodulin-dependent kinase II. J Neurosci, 27, 14007-11.
25. Bloodgood BL, Sabatini BL. (2007) Ca signaling in dendritic spines. Curr Opin Neurobiol, 17, 345-51.
26. Bloodgood BL, Sabatini BL. (2007) Nonlinear regulation of unitary synaptic signals by CaV(2.3) voltage-sensitive calcium channels located in dendritic spines. Neuron, 53, 249-60.
27. Carter AG, Soler-Llavina GJ, Sabatini BL. (2007) Timing and location of synaptic inputs determine modes of subthreshold integration in striatal medium spiny neurons. J Neurosci, 27, 8967-77.
28. Ellis-Davies GCR, Matsuzaki M, Paukert M, Kasai H, Bergles DE. (2007) 4-Carboxymethoxy-5,7-dinitroindolinyl-Glu: an improved caged glutamate for expeditious ultraviolet and two-photon photolysis in brain slices. J Neurosci, 27, 6601-4.
29. Gasparini S, Losonczy A, Chen X, Johnston D, Magee JC. (2007) Associative pairing enhances action potential back-propagation in radial oblique branches of CA1 pyramidal neurons. J Physiol, 580, 787-800.
30. Harvey CD, Svoboda K. (2007) Locally dynamic synaptic learning rules in pyramidal neuron dendrites. Nature, 450, 1195-200.
31. Nikolenko V, Poskanzer KE, Yuste R. (2007) Two-photon photostimulation and imaging of neural circuits. Nat Methods, 4, 943-50.
32. Sabatini BL. (2007) Neuroscience: neighbourly synapses. Nature, 450, 1173-5.
33. Sobczyk A, Svoboda K. (2007) Activity-dependent plasticity of the NMDA-receptor fractional Ca current. Neuron, 53, 17-24.
34. Bloodgood BL, Sabatini BL. (2008) Regulation of synaptic signalling by postsynaptic, non-glutamate receptor ion channels. J Physiol, 586, 1475-80.
35. Busetto G, Higley MJ, Sabatini BL. (2008) Developmental presence and disappearance of postsynaptically silent synapses on dendritic spines of rat layer 2/3 pyramidal neurons. J Physiol, 586, 1519-27.
36. Honkura N, Matsuzaki M, Noguchi J, Ellis-Davies GCR, Kasai H. (2008) The subspine organization of actin fibers regulates the structure and plasticity of dendritic spines. Neuron, 57, 719-29.
37. Losonczy A, Makara JK, Magee JC. (2008) Compartmentalized dendritic plasticity and input feature storage in neurons. Nature, 452, 436-41.
38. Matsuzaki M, Ellis-Davies GCR, Kasai H. (2008) Three-dimensional mapping of unitary synaptic connections by two-photon macro photolysis of caged glutamate. J Neurophysiol, 99, 1535-44.
39. Tanaka J, Horiike Y, Matsuzaki M, Miyazaki T, Ellis-Davies GCR, Kasai H. (2008) Protein synthesis and neurotrophin-dependent structural plasticity of single dendritic spines. Science, 319, 1683-7.
40. Heine M, Groc L, Frischknecht R, Beique JC, Lounis B, Rumbaugh G, Huganir RL, Cognet L, Choquet D. (2008) Surface mobility of postsynaptic AMPARs tunes synaptic transmission. Science, 320, 201-5.
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